Research

Protocols

Molecular Biology

Bacterial growth media

Bacterial cultures

Cryopreservation of bacterial cultures

Thawing of bacterial cultures

Plasmid mini-prep (Qiagen)

Plasmid maxi-prep (Qiagen)

Plasmid maxi-prep (CsCl method)

Bacterial transformation

Dephosphorylation of linearized DNA

Ligation

Agarose gel electrophoresis

PCR amplification

Site-directed mutagenesis (PCR)

 

Mammalian Cell Culture

Growth media of common cell lines

Passage of mammalian cells

Cryopreservation of mammalian cells

Thawing of mammalian cells

 

Gene Expression and Silencing

Transfection

 

Fugene 6

 

Lipofectamine 2000

Retroviral gene expression

 

Retroviral production

 

Retroviral transduction

siRNA-mediated silencing

 

TransIT-TKO

 

Oligofectamine

Lentiviral shRNA-mediated silencing

 

Lentiviral production

 

Lentiviral transduction

 

Cell Cycle Analysis

Cell synchronization agenents

G2/M synchronization

Double-thymidine block

Cell cycle profile analysis by FACS

 

Miscellaneous Techniques

Centrosome isolation

Microtubule binding assay

Protein Analysis

Antibodies

Mammalian cell lysis

Protein quantitation

 

Bradford

 

BCA

Preparation of Tris-Glycine-SDS PAGE

Electrophoresis, and staining

 

Tris-glycine-SDS

 

NuPAGE Tris-Glycine/MOPS

 

NuPAGE Tris-acetate/acetate

 

Coomasie staining

 

Silver staining

Protein transfer

 

Transfer

 

Ponceau S staining

Immunodetection

 

Chemilluminescence

 

Odyssey infrared detection

In-cell western

 

Immunofluorescence Microscopy

Fluorophores

Cell fixation, and permeabilization

 

Paraformaldehyde

 

Methanol

 

Trichloro-acetic acid (TCA)

Blocking, immunostaining, and detection

Specialized techniques

 

Phospho-H3 staining for mitotic cells

 

RhoA staining

 

Centrosome amplification assay

 

Cytokinesis assay

 

Protein Function Analyses

Kinase assays

 

p70S6K

 

mTORC2

 

PLK1

GTPase assays

 

Rheb GTPase

 

Rho GTPase

 

Rac1 and cdc42 GTPases



Protocols (in alphabetical order)

Agarose gel electrophoresis

NuPAGE Tris-acetate/acetate

 

NuPAGE Tris-Glycine/MOPS

Bacterial cultures

 

Bacterial cultures, Cryopreservation

Odyssey infrared detection

Bacterial growth media

Oligofectamine

Bacterial transformation

 

BCA

p70S6K kinase assay

Blocking, immunofluorescence

Paraformaldehyde, immunofluorescence

Blocking, western

Passage of mammalian cells

Bradford

PCR amplification

 

Phospho-H3 staining for mitotic cells

Cell cycle analysis

Plasmid maxi-prep (CsCl method)

Cell cycle profile analysis by FACS

Plasmid maxi-prep (Qiagen)

Cell fixation, and permeabilization, immunofluorescence

Plasmid mini-prep (Qiagen)

Cell synchronization agenents

PLK1 kinase assay

Centrosome amplification assay

Ponceau S staining

Centrosome isolation

 

Chemilluminescence

Rac1 and cdc42 GTPase assays

Coomasie staining

Retroviral production

Cytokinesis assay

Retroviral transduction

 

Rheb GTPase assay

Dephosphorylation of linearized DNA

Rho GTPase assay

Double-thymidine block

RhoA staining, immunofluorescence

 

 

Fluorophores

Silver staining, protein gels

Fugene 6

siRNA-mediated silencing

 

Site-directed mutagenesis (PCR)

G2/M synchronization

 

Growth media of common cell lines

Thawing of bacterial cultures

 

Thawing of mammalian cells

In-cell western

Transfection, Fugene 6

 

Transfection, Lipofectamine 2000

Kinase assays

Transfer or proteins

 

TransIT-TKO

Lentiviral production

Trichloro-acetic acid (TCA) fixation, immunofluorescence

Lentiviral transduction


Tris-Glycine-SDS, electrophoresis

Ligation

Tris-Glycine-SDS PAGE, preparation of gels

Lipofectamine 2000

 

 

 

Mammalian cells, Cryopreservation

 

Mammalian cell lysis

 

Methanol fixation, immunofluorescence

 

Microtubule binding assay

 

mTORC2 kinase assay

 

   

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